PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.PUL8H
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 169aa    MW: 18541.5 Da    PI: 10.4299
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.PUL8HgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-11249454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +h ++Er+RR+++N+ +  Lr+l P+    + k+ + a+i   ++e+Ik+L
  Araip.PUL8H  2 SHIAVERNRRKQMNEHLKVLRSLTPSF---YIKRGDQASIIGGVIEFIKEL 49
                 89************************9...9******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.62E-11154No hitNo description
SuperFamilySSF474591.57E-15168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.494149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-8249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-12261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-9455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MSHIAVERNR RKQMNEHLKV LRSLTPSFYI KRGDQASIIG GVIEFIKELH QVLQALESQK  60
RRKSLSPSPG PSPKALQPAF QQNDSPTGMG GGSFKELGAS CNSSVADVEV KISGSNVILR  120
VISHRIPGQV AKIIAVLEAL SFEVLHLNIS SMEDTVLYHF VVKVSKSIQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM2038537e-55KM203853.1 Vitis vinifera clone 2 MUTE (MUTE) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015958606.11e-117PREDICTED: transcription factor MUTE
RefseqXP_016194923.11e-117PREDICTED: transcription factor MUTE
SwissprotQ9M8K61e-72MUTE_ARATH; Transcription factor MUTE
TrEMBLA0A151U0L64e-92A0A151U0L6_CAJCA; Transcription factor MUTE
STRINGGLYMA15G11130.24e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112523036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-72bHLH family protein